BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G04SP1|AL425752
(750 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1717 1268 0.0
>3x_Contig1717
Length = 18389
Score = 1268 bits (615), Expect = 0.0
Identities = 697/749 (93%), Gaps = 1/749 (0%)
Strand = Plus / Plus
Query: 3 acatcactttatgagcgcctgccaaagagaagtcgtagggaggggaggggtggtatttcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8746 acatcactttatgagcgcctgccaaagagaagtcgtagggaggggaggggtggtatttcc 8805
Query: 63 gcgggacccttctacggataattaataaacattaattttgatggtcctgttctatcgtca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8806 gcgggacccttctacggataattaataaacattaattttgatggtcctgttctatcgtca 8865
Query: 123 atttatattthmhtgagagtbagagtyatccccttcattgttatathamcmagggttttt 182
|||||||||| ||||||| ||||| ||||||||||||||||||| | | |||||||||
Sbjct: 8866 atttatatttaaatgagagtgagagtaatccccttcattgttatataaacaagggttttt 8925
Query: 183 ctagtcttatggaaatwgggatathmmgcccttcamacatcccttttcccttaccttatt 242
|||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 8926 ctagtcttatggaaatagggatataaagcccttcaaacatcccttttcccttaccttatt 8985
Query: 243 ttcmcattatttgatcagatattttttttcttggactctttttttttttcggggttttgt 302
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8986 ttcacattatttgatcagatattttttttcttggactctttttttttttcggggttttgt 9045
Query: 303 tttgctgtttactggacccttagaatatttthggrttwttttgttttthagtyagagttc 362
|||||||| |||||||||||||||||||||| || || |||||||||| ||| |||||||
Sbjct: 9046 tttgctgtatactggacccttagaatattttaggattattttgtttttaagtaagagttc 9105
Query: 363 taagtccttttactaaamatcagatcmttaasmttgtttcmtttcmattcataagcyata 422
||||||||||||||||| |||||||| |||| ||||||| |||| |||||||||| |||
Sbjct: 9106 taagtccttttactaaaaatcagatcattaaaattgtttcatttcaattcataagctata 9165
Query: 423 attcgcttgggaaacgaaaagttaaaggttttccacataaatcmtgatccccatmtcmag 482
||||||||||||||||||||||||||||||||| |||||||| |||||| || || ||
Sbjct: 9166 attcgcttgggaaacgaaaagttaaaggttttcaacataaataatgatccaaatatcaag 9225
Query: 483 tcaaccttatctmasagttaamvmcmgamatgtcaaacmttgacagagccgctcctgaga 542
|||||||||||| | |||||| | || ||||||||| |||| ||||||||||||||||
Sbjct: 9226 tcaaccttatctaaaagttaaaaacagaaatgtcaaacattgaaagagccgctcctgaga 9285
Query: 543 cgc-gccmgatactgagcctgttgtcgctgttccattaaccgacgagcctgtcgttgctg 601
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9286 cgcagccagatactgagcctgttgtcgctgttccattaaccgacgagcctgtcgttgctg 9345
Query: 602 cgcctkcaccagctactkttccagataccaccgtgccagchagtyagccagttgatgtac 661
||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 9346 cgcctgcaccagctactgttccagataccaccgtgccagcaagtcagccagttgatgtac 9405
Query: 662 aaccaatgtycgagccagttatttaggagactccatcctcaaagtcttatttcccataca 721
||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9406 aaccaatgtccgagccagtgattcaggagactccatcctcaaagtcttatttcccataca 9465
Query: 722 cgagcagcttgttccacaatattgtccgt 750
|||||||||||||||||||||||||||||
Sbjct: 9466 cgagcagcttgttccacaatattgtccgt 9494
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.718 1.35
Gapped
Lambda K H
1.43 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8805
Number of Sequences: 1807
Number of extensions: 8805
Number of successful extensions: 144
Number of sequences better than 1.0e-20: 1
length of query: 750
length of database: 10,358,551
effective HSP length: 16
effective length of query: 734
effective length of database: 10,329,639
effective search space: 7581955026
effective search space used: 7581955026
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.4 bits)